No remote found
Workflow
The following workflow defines all tasks necessary to upload, preprocess, share, and map a new data dictionary.
- Upload cohort data
- Open Google Sheet
- Run automated mapping for new data dictionary
- Share Google Sheet with submitter
- Prepare data dictionary for build
- Run automated validation
- Build data dictionary
- View results
- Add data dictionary to Version Control
- Prepare git commit (click on Commit in Version menu)
- Push changes to GitHub (click on Push in Version menu), and make pull request.
- Delete Google sheet (Caution, cannot be undone)
IHCC Data Admin Tasks
Console
Action create-docker-image-and-container started at 2022-11-18T15:45:01.824Z (2022-11-18T15:45:01.824Z)
Success
$ docker build --tag ihcc-cohorts-data-harmonization-test-eba:latest . > /opt/droid/projects/IHCC-cohorts-data-harmonization-test/temp/EBA/console.txt 2>&1 && docker create --interactive --tty --name IHCC-cohorts-data-harmonization-test-EBA --volume /opt/droid/projects/IHCC-cohorts-data-harmonization-test/workspace/EBA/:/workspace/ --volume /opt/droid/projects/IHCC-cohorts-data-harmonization-test/temp/EBA/:/tmp/droid/ ihcc-cohorts-data-harmonization-test-eba sh >> /opt/droid/projects/IHCC-cohorts-data-harmonization-test/temp/EBA/console.txt 2>&1 && docker start IHCC-cohorts-data-harmonization-test-EBA >> /opt/droid/projects/IHCC-cohorts-data-harmonization-test/temp/EBA/console.txt 2>&1
Sending build context to Docker daemon 29.84MB Step 1/4 : FROM obolibrary/odkfull ---> 742aa3c8a1a2 Step 2/4 : COPY requirements.txt /tools/ihcc-requirements.txt ---> Using cache ---> 751aff4a0691 Step 3/4 : RUN pip install -r /tools/ihcc-requirements.txt ---> Using cache ---> 88260e0bccab Step 4/4 : RUN apt-get install aha dos2unix sqlite3 ---> Using cache ---> 060b1cee53ad Successfully built 060b1cee53ad Successfully tagged ihcc-cohorts-data-harmonization-test-eba:latest f11d3a880ea399ec8abdd80e7fb3bffded8a56c1c53a9b9a09dda1332eacca40 IHCC-cohorts-data-harmonization-test-EBA